Executive Summary
AI
- Michael Schmidt opens TWIM 342 with a JAMA Oncology paper published 15 September on oral bacterial and fungal microbiome and subsequent risk for pancreatic cancer, a disease whose five-year survival hovers around 13%.2:22
- The strength is the prospective design: oral wash samples from over 122,000 healthy people in the Cancer Prevention Society 2 and PLCO cohorts, of whom 445 developed pancreatic cancer over a median follow-up of almost nine years.7:08
- Whole genome shotgun sequencing and fungal ITS sequencing found 21 bacterial species plus four fungi including Candida albicans and Candida tropicalis, combined into a single microbial risk score that raised the odds of pancreatic cancer by an effect size of 3.44.12:47
- Vincent Racaniello then presents a Cell Reports paper on gut metagenome and plasma metabolome profiles in 1,225 older adults averaging 78 years, 515 of whom (42%) were poor sleepers by the Pittsburgh Sleep Quality Index.27:43
- A mediation analysis found pyruvic acid pathways and Faecalibacterium prausnitzii mediated 10%, 4% and 3.9% of the association between sleep quality and the frailty index, though the authors call it exploratory and hypothesis-generating rather than causal.47:37
Key Quote
“So on these podcasts, we do believe that expertise is valuable.”
— Vincent Racaniello1:32
Key Quote
“And that's why it's ridiculous for this administration to take funding.”
— Vincent Racaniello9:09
Key Quote
“That's one creature you don't want in your mouth, Porphymonis gingivalis.”
— Michael Schmidt11:27